DAI Labs Duke
Amy C Sharma, Ph.D.
Postdoctoral Associate, Radiology
Contact Information
Department: Radiology
Address:

Duke Advanced Imaging Labs

Duke University Medical Center

2424 Erwin Rd

Suite 302

Durham, NC 27705

Phone:

(919) 684-1440 (main line)

(919) 684 1471 (desk)

Fax: (919) 684-1491
Email: amy.sharma (AT) duke.edu
Web: http://dailabs.duhs.duke.edu/acs.htm
Research Interests Qualifications Education
Experience Youth Programs Publications
Ph.D. Thesis Research

 

Research Interests                                                                                                Top

Last Modified: February 6, 2008

I am just beginning my position as a post-doc for Dr. Georgia Tourassi in the area of Information-Theoretic Computer-Assisted Detection (CAD). Please see Dr. Tourassi's web-page for a complete description of the project and check back for future updates.

Qualifications                                                                                                          Top

My research experience to date has allowed me to develop and hone a diverse technical skill set in radiation physics and engineering.

Radiation Physics:  
  • radiation dose measurement
  • spectral analysis
  • particle interactions
  • gamma camera quality metrics
  • radiation detection and measurement
 
Engineering:  
  • hardware design
  • image reconstruction
  • machining
  • image analysis
  • motors
  • image processing
  • circuit design
  • image quality metrics
  • logic design
  • medical imaging devices
  • Boolean algebra
  • data acquisition
  • signal processing
  • statistics
Computer:  
  • C++
  • Matlab
  • Java
  • Office Suite
  • Perl
  • UNIX / Linux / Mac OSX
  • VHDL
  • Adobe Photoshop
  • Monte Carlo simulations
  • HTML
  • GEANT4
  • Dreamweaver

 

Additionally, creating a new imaging modality from the ground up was a unique experience and it required that I develop the ability to address concerns of:

  • equipment procurement
  • imaging feasibility
  • practical applications of NSECT
  • negotiate the use of facilities for my project

The death of Carey Floyd has been a tremendous blow to the development of NSECT. We are left to carry on his work with little oversight or guidance. It was a tremendous challenge to fuse the diverse talents of my committee, gather knowledge relevant to the topic and self-guide the research necessary to continue developing NSECT and complete my thesis.

The challenges associated with NSECT and my volunteer work have helped to develop a set of project management skills

  • experimental design
  • planning
  • resource procurement
  • management
  • adaptability
  • information gathering
  • data analysis
  • data synthesis

 

Education                                                                                                              Top

Duke University, Durham, NC: PhD, Biomedical Engineering, December, 2007

Thesis: Development and Design of a Near-Field High-Energy Gamma Camera for use with  Neutron Stimulated Emission Computed Tomography.

    Duke University, Durham, NC: BSE, Biomedical and Electrical Engineering, 2001

    Departmental Graduation with Distinction -- Biomedical Engineering

    Pratt School of Engineering Undergraduate Research Fellow

     

    Experience                                                                                                               Top

    Duke University, Dept of Radiology, Durham, NC: Postdoctoral Associate

    Feb 2008 – Present:

    Advisors: Dr Georgia Tourassi

    Project: Information - Theoretic Computer - Assisted Detection (CAD)

     

    Duke University, Dept of Biomedical Engineering, Durham, NC: Graduate Student, PhD Candidate

    Jan 2005 – Dec 2007:

    Advisors: Drs. Carey Floyd, Georgia Tourassi and Gregg Trahey

    Project: Neutron Stimulated Emission Computed Tomography (NSECT)

    • Designed, built and tested a prototype near-field high-energy gamma camera
    • Developed a mathematical model describing the near-field behavior of the camera
    • Simulated camera behavior and optimized camera design
    • Verified the accuracy of math model and simulation environment with experimental data
    • Developing and identifying valid image reconstruction techniques

    Aug 2003 – Jan 2005

    Advisor: Dr. Kathy Nightingale.

    Project: Acoustic Radiation Force Impulse (ARFI) Imaging

    • Streamlined ARFI data acquisition on ultrasound scanner by developing a user interface program
    • Obtained in vivo images of suspicious breast lesions by assisting in clinical trials
    • Preformed ultrasound image processing and data analysis

    Teaching Assistant

    Class: Devices for People with Disabilities

    Professor: Dr. Larry Bohs

    • Assisted in project development and design
    • Learned and oversaw use of shop hardware: lathe, mill, band saw, drill press, etc.

     

    IBM, Austin, TX: Engineer / Scientist

    June 2001 – Aug. 2003

    • Logic designer for the I/O controller on the POWER 5 microprocessor design
    • Synthesized logic in a VHDL environment
    • Interacted with verification team to improve and verify design functionality
    • Measured logic timing and assured hardware compliance

     

    Duke University, Durham, NC

    Undergraduate Research Fellow

    Jan. 2000 – May 2001

    • Assisted in ultrasound acquisition and Matlab analysis of blood flow data
    • Designed and built a data acquisition board for an ultrasound machine

    Teaching Assistant

    Aug. 1998 – May 2001

    • Computer Science Fundamentals, Programming Design/Analysis I & II, Computer Architecture.
    • Held office hours and review sessions.

     

    Booz Allen & Hamilton, Vienna, VA: Intern

    Summer 1999

    • Interfaced with clients as primary client contact and project manager for software design flowcharting
    • Created new graphics for easier flow visualization

    Pacific Sierra Research Corporation, Rosslyn, VA: Intern

    Summer 1998

    • Collaborated on a team to develop client/server applications in Java and Unix

     

    Personal

    I have my private pilot’s license and fly when the funding lets me.

    Youth Programs                                                                                                  Top

    Duke Youth Summer Programs: On-site manager

    Summer 2006 & 2007

    Duke's Summer Techtronics for Girls

    • Started a week-long engineering day camp for 16 middle school girls
    • Designed, developed, implemented and instructed curriculum
    • Organized and oversaw three camp counselors

    Summer Techtronics Video

    Summer 2007

    Duke's Bioscience and Engineering Camp

    • Revamped curriculum for two-week engineering immersion for 24 middle school children
    • Organized and oversaw seven camp counselors

    IBM EXITE Program

    Summer 2006 & 2007

    Week long summer camp to teach high-risk middle school girls about engineering

    • Assisted in and ran engineering activities
    • Participated in a mentorship program that involved maintaining contact with campers to inspire them to achieve in school and in science

    Abstracts & Publications                                                                                   Top

    Last Modified: February 5, 2008

    Peer Reviewed Publications

    Sharma, AC, Harrawood, BP, Bender, JE, Tourassi, GD, Kapadia, AJ. “Neutron Stimulated Emission Computed Tomography: a Monte Carlo Simualtion approach.” Phys. Med. Biol., vol. 52, pp 6117-6131, Oct 2007.

    ** selected for Phys. Med. Biol. Hightlights of 2007.

    Sharma, AC, Tourassi, GD, Kapadia, AJ, Harrawood, BP, Crowell, AS, Kiser, MR, Howell, CR, Floyd, CE. “Design and Development of a High-Energy Gamma Camera for use with NSECT Imaging: Feasibility for Breast Imaging.” IEEE TNS, vol. 54, no. 5, pp 1498-1505, Oct 2007.

    Bender, JE, Kapadia, AJ, Sharma, AC, Tourassi, GD, Harrawood, BP, Floyd, CE. “Breast cancer detection using Neutron Stimulated Emission Computed Tomography: prominent elements and dose requirements.” Medical Physics, vol. 34, no. 10, pp 3866-3871, Oct 2007.

    Floyd, CE, Sharma, AC, Bender, JE, Kapadia, AJ, Xia, JQ, Harrawood, BP, Tourassi, GD, Lo, JY, Kiser, MR, Crowell, AS, Pedroni, RD, Marci, RA, Tajima, S, Howell, CR. “Neutron Stimulated Emission Computed Tomography: Background Corrections.” Nuc. Inst. And Meth. B. vol. 254, no. 2, pp 329-336, Jan 2007. 

    Floyd, CE, Bender, JE, Sharma, AC, Kapadia, AJ, Xia, J, Harrawood, BP, Tourassi, GD, Lo, JY, Crowell, A, Howell, CR. “Introduction to Neutron Stimulated Emission Computed Tomography.” Phys Med Biol. vol. 51, pp 3375-3390, Jul. 2006. URL: http://stacks.iop.org/0031-9155/51/3375

    ** Abstract in the Yearbook of Nuclear Medicine

    Palmeri, ML, Sharma, AC, Bouchard, RR, Nightingale, RW, Nightingale, KR. “A Finite Element Method Model of Soft Tissue Response to Impulsive Acoustic Radiation Force,” IEEE Trans. Ultrason., Ferroelect., Freq.  Contr., vol. 52, no. 10, pp. 1699-1712, Oct. 2005.

     

    Works in Progress

    Floyd, CE, Kapadia, AJ, Bender, JE, Sharma, AC, Xia, JQ, Harrawood, BP, Tourassi, GD, Lo, JY, Corwell, AS, Kiser, MR, Howell, CR. “Neutron Stimulated Emission Computed Tomography of a Multi-element Phantom.” .

    Sharma, AC, Tourassi, GD, Turkington, TG, Floyd, CE. “Near-Field High-Energy Spectroscopic Gamma Imaging Using a Rotation Modulation Collimator.”

    Sharma, AC, Tourassi, GD, Kapadia, AJ, Crowell, AS, Kiser, MR, Hutcheson, A, Harrawood, BP, Howell, CR. "NSECT: Elemental Composition of a Mouse."

    Kapadia, AJ, Sharma, AC, Bender, JE, Tourassi, GD, Howell, CR, Crowell, AS, Kiser, MR, Harrawood, BP, Floyd, CE. “Neutron Stimulated Emission Computed Tomography for Diagnosis of Breast Cancer.” IEEE TNS (submitted Dec 2006).

     

    Conference Proceedings

    Sharma, AC, Kapadia, AJ, Harrawood, BP, Tourassi, GD. "optimization of a Rotating Modulation Collimator for NSECT Imaging." Proceedings of the 2007 IEEE NSS-MIC. Honolulu, HI, Nov 2007.

    Sharma, AC, Tourassi, GD, Kapadia, AJ, Crowell, AS, Kiser, MR, Hutcheson, A, Harrawood, BP, Howell, CR, Floyd, CE. “Elemental Spectrum of a Mouse Obtained via Neutron Stimulation.” Proceedings of the 2007 SPIE Symposium on Medical Imaging, vol. 6510, 65100K, 2007.

    Sharma, AC, Tourassi, GD, Kapadia, AJ, Bender, JE, Xia, JQ, Harrawood, BP, Crowell, AS, Kiser, MR, Howell, CR, Floyd, CE. “Development of a High-Energy Gamma Camera for use with NSECT Imaging of the Breast.” Proceedings of the 2006 IEEE NSS-MIC. San Diego, CA Nov. 2006.

    Sharma, AC, Tourassi, GD, Kapadia, AJ, Harraworrd, BP, Bender, JE, Crowell, AS, Kiser, MR, Howell, CR, Floyd, CE. “Dessign and Construction of a Prototype Rotation Modulation Collimator for Near-Field High-Energy Spectroscopic Gamma Imaging,” Proceedings of the 2006 IEEE NSS-MIC. San Diego, CA, Nov. 2006.

    Kapadia, AJ, Sharma, AC, Tourassi, GD, Bender, JE, Howell, CR, Crowell, AS, Kiser, MR, Floyd, CE. "Neutron Spectroscopy of Mouse Using Neutron Stimulated Emission Computed Tomography (NSECT)," Proceedings of the 2006 IEEE NSS-MIC. San Diego, CA Nov. 2006.

    Kapadia, AJ, Sharma, AC, Tourassi, GD, Bender, JE, Howell, CR, Crowell, AS, Kiser, MR, Floyd, CE. "Neutron Stimulated Emission Computed Tomography (NSECT) for Early Detection of Breast Cancer," Proceedings of the 2006 IEEE NSS-MIC. San Diego, CA Nov. 2006.

    Kapadia, AJ, Sharma, AC, Tourassi, GD, Bender, JE, Howell, CR, Crowell, AS, Kiser, MR, Floyd, CE. "Non-Invasive Estimation of Potassium (39K) in Bovine Liver Using Neutron Stimulated Emission Computed Tomography (NSECT)," Proceedings of the 2006 IEEE NSS-MIC. San Diego, CA Nov. 2006.

    Sharma, AC, Floyd, CE, Harrawood, B, Tourassi, G, Kapadia, A, Bender, J, Lo, J, Howell, C. “Rotating slat collimator design for high-energy near-field imaging” Proceedings of the 2006 SPIE Symposium on Medical Imaging, vol. 6142, pp. 405-413, 2006.

    Floyd, CE, Bender, JE, Harrawood, BP, Sharma, AC, Kapadia, AJ, Tourassi, GD, Lo, JY, Howell, CR. “Breast cancer diagnosis using Neutron Stimulated Emission Computed Tomography: Dose and Count requirements.” Proceedings of the 2006 SPIE Symposium on Medical Imaging, vol. 6142, pp. 597-603, 2006.

    Bender, JE, Floyd, CE, Harrawood, BP, Kapadia, AJ, Sharma, AC, Jesneck, JL. "The Effect of Detector Resolution for Quantitative Analysis of Neutron Stimulated Emission Computed Tomography." Proceedings of the 2006 SPIE Symposium on Medical Imaging, vol. 6142, pp. 1597-1605, 2006.

    Nightingale, KR, MS, Palmeri, ML, Frinkley, KD, Sharma, AC, Zahi, L, Trahey, GE. “Ultrasonic Imaging of the Mechanical Properties of Tissues Using Localized, Transient Acoustic Radiation Force,” Proceedings of the 2005 ICASSP, 2005.

    Sharma, AC, Trahey, GE, Frinkley, KD, Soo, MS, Nightingale, KR. “Image processing and data acquisition optimization for Acoustic Radiation Force Impulse imaging of  in vivo breast masses.” Proceedings of the 2005 SPIE Symposium on Medical Imaging, vol. 5750, pp. 205-215, 2005.

    Sharma, AC, Soo, MS, Trahey, GE, Nightingale, KR. “Acoustic Radiation Force Impulse Imaging of In Vivo Breast Masses,” Proceedings of the 2004 IEEE Ultrasonics Symposium, vol. 1, pp. 728-731, 2004.

    Nightingale, KR, Soo, MS, Palmeri, ML, Congdon, AN, Frinkley, KD, Trahey, GE. “Imaging Tissue Mechanical Properties Using Impulsive Acoustic Radiation Force,” Proceedings of the 2004 IEEE International Symposium on Biomedical Imaging Macro to Nano, vol. 1, pp. 41-44, 2004.

    Congdon, AN, Foley, JL. "Motorized Swing for Child up to Fifty Pounds," RESNA 2001 Annual Conference Proceedings. Reno, NV, June 22-26, 2001. 376-378.

    Gallippi, CM, Bohs, LN, Anderson, ME, Congdon, AN, Trahey, GE. “Lateral

    Blood Velocity Measurement in the Carotid Artery via Speckle Tracking,” 2001 IEEE Ultrasonics Symposium, vol. 2, pp. 1451-1455, 2001.

     

    Last Modified: February 6, 2008

    To complete my thesis, I studied an area of Neutron Stimulated Emission Computed Tomography (NSECT), a new spectroscopic imaging modality developed by Dr. Carey E. Floyd, Jr.  NSECT is similar to gamma emission imaging modalities such as PET and SPECT, but instead of using injected radiotracers, NSECT detects excited stable nuclei from within the body to determine the elemental composition of the region of interrogation.  Several studies have shown a link between elemental composition and tumor disease state.  Additionally, conditions such as iron overload and Wilson’s disease are currently managed through biopsy and would benefit from a non-invasive spectroscopic technique.

    The main focus of NSECT research to date has been on:

    • Feasibility of identifying elements from the resultant gamma spectra
    • Improving signal to noise in order to reduce neutron dose
    • Development of a high-energy gamma camera to generate elemental concentration images

    NSECT generates elemental composition data by interrogating the body of interest with a beam of high energy neutrons. These neutrons scatter inelastically off of elemental nuclei, exciting them.  As the nuclei relax, they emit characteristic gamma radiation which allows identification of elements located within the region of interrogation through non-invasive and non-destructive means.

    Experiments conducted using the high energy neutron beam source in Triangle Universities Nuclear Laboratory have provided excellent proof-of-concept that elemental spectrums can be obtained with reasonable neutron dose.  To date we have successfully identified elements present within breast tissue, bovine liver tissue and a mouse specimen.  Using first generation CT techniques we have successfully reconstructed images of a copper and iron ‘N’ phantom.

    Rotating collimator

    Prototype high energy gamma camera

    My dissertation research focused on the development of a near-field high-energy gamma camera. I adapted space-based gamma technology using a rotating modulation collimator (RMC) placed in front of a High Purity Germanium (HPGe) semiconductor gamma detector.  The HPGe detector is necessary to obtain high resolution gamma spectrums, but it is a 7 cm diameter crystal and cannot provide spatial information.  The RMC modulates the incoming gamma rays in a manner unique to their location in space, allowing reconstruction of images. 

    To complete my thesis I completed the following:

    • built a prototype RMC and tested it with radioactive point sources
    • developed a near-field mathematical model to describe how the RMC modulates gammas in the near-field
    • worked to develop a Monte Carlo simulation environment in GEANT4 of the RMC, detector and gamma point sources
    • verified the accuracy of mathematical model and simulation environment by comparing the simulated behavior to the experimental results
    • systematically determined optimal imaging parameters (including an RMC design that provides adequate modulation to facilitate image reconstruction)
    • determined the imaging limits of the system

    My overall conclusion: this imaging system is not robust enough for near-field medical applications, but has great promise for mid-field homelank security applications such as cargo container screening